Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Gm13899-201ENSMUST00000121519 1255 ntBASIC15.82■□□□□ 0.12
Msh5Q9QUM7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Gm43692-201ENSMUST00000198236 1062 ntBASIC15.82■□□□□ 0.12
Msh5Q9QUM7 CT025525.2-201ENSMUST00000227743 423 ntBASIC15.82■□□□□ 0.12
Msh5Q9QUM7 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.82■□□□□ 0.12
Msh5Q9QUM7 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh5Q9QUM7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.81■□□□□ 0.12
Msh5Q9QUM7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh5Q9QUM7 BC037039-201ENSMUST00000192003 2205 ntBASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Gm6257-201ENSMUST00000163864 910 ntBASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 CT010431.1-201ENSMUST00000221249 1080 ntBASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Gm25131-201ENSMUST00000082653 151 ntBASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh5Q9QUM7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.79■□□□□ 0.12
Msh5Q9QUM7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms