Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Gm18101-201ENSMUST00000215769 548 ntBASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf13bQ9ET35 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf13bQ9ET35 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf13bQ9ET35 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Tnfrsf13bQ9ET35 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Tnfrsf13bQ9ET35 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf13bQ9ET35 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms