Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.03■□□□□ -0
Rrp8Q9DB85 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rrp8Q9DB85 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.03■□□□□ -0
Rrp8Q9DB85 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.03■□□□□ -0
Rrp8Q9DB85 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
Rrp8Q9DB85 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.03■□□□□ -0
Rrp8Q9DB85 Gm10499-201ENSMUST00000174094 934 ntBASIC15.03■□□□□ -0
Rrp8Q9DB85 Gm10253-201ENSMUST00000194270 940 ntBASIC15.03■□□□□ -0
Rrp8Q9DB85 Gm5186-201ENSMUST00000218781 920 ntBASIC15.03■□□□□ -0
Rrp8Q9DB85 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.03■□□□□ -0
Rrp8Q9DB85 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rrp8Q9DB85 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rrp8Q9DB85 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rrp8Q9DB85 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rrp8Q9DB85 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Rrp8Q9DB85 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Rrp8Q9DB85 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.02■□□□□ -0
Rrp8Q9DB85 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.02■□□□□ -0
Rrp8Q9DB85 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Rrp8Q9DB85 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rrp8Q9DB85 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rrp8Q9DB85 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Rrp8Q9DB85 Gm14722-201ENSMUST00000118943 689 ntBASIC15.02■□□□□ -0
Rrp8Q9DB85 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.02■□□□□ -0
Rrp8Q9DB85 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.02■□□□□ -0
Rrp8Q9DB85 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rrp8Q9DB85 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.02■□□□□ -0
Rrp8Q9DB85 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rrp8Q9DB85 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rrp8Q9DB85 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rrp8Q9DB85 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rrp8Q9DB85 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Rrp8Q9DB85 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rrp8Q9DB85 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rrp8Q9DB85 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rrp8Q9DB85 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rrp8Q9DB85 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Rrp8Q9DB85 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rrp8Q9DB85 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rrp8Q9DB85 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.01□□□□□ -0.01
Rrp8Q9DB85 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rrp8Q9DB85 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rrp8Q9DB85 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rrp8Q9DB85 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms