Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Hdhd3Q9CYW4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hdhd3Q9CYW4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hdhd3Q9CYW4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Hdhd3Q9CYW4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.55□□□□□ -0.4
Hdhd3Q9CYW4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hdhd3Q9CYW4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Hdhd3Q9CYW4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Gm30025-201ENSMUST00000218555 728 ntBASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hdhd3Q9CYW4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hdhd3Q9CYW4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hdhd3Q9CYW4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hdhd3Q9CYW4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hdhd3Q9CYW4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hdhd3Q9CYW4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hdhd3Q9CYW4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hdhd3Q9CYW4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hdhd3Q9CYW4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hdhd3Q9CYW4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hdhd3Q9CYW4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Gm10052-201ENSMUST00000168019 960 ntBASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Gm29257-201ENSMUST00000186115 639 ntBASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Gm7729-201ENSMUST00000050143 801 ntBASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hdhd3Q9CYW4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms