Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Gm13559-201ENSMUST00000120476 863 ntBASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Gm10052-201ENSMUST00000168019 960 ntBASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Gm7729-201ENSMUST00000050143 801 ntBASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim13Q9CYB0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Mir7071-201ENSMUST00000184847 69 ntBASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim13Q9CYB0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Mir5130-201ENSMUST00000175160 84 ntBASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Mir6404-201ENSMUST00000183699 94 ntBASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim13Q9CYB0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms