Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
Trim16Q99PP9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim16Q99PP9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim16Q99PP9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim16Q99PP9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.08■□□□□ 0
Trim16Q99PP9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim16Q99PP9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.08■□□□□ 0
Trim16Q99PP9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.08■□□□□ 0
Trim16Q99PP9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim16Q99PP9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Trim16Q99PP9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.07■□□□□ 0
Trim16Q99PP9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.07■□□□□ 0
Trim16Q99PP9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim16Q99PP9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim16Q99PP9 Gm27867-201ENSMUST00000184778 125 ntBASIC15.07■□□□□ 0
Trim16Q99PP9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.07■□□□□ 0
Trim16Q99PP9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim16Q99PP9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.07■□□□□ 0
Trim16Q99PP9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Trim16Q99PP9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.07■□□□□ 0
Trim16Q99PP9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim16Q99PP9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim16Q99PP9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim16Q99PP9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim16Q99PP9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim16Q99PP9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Trim16Q99PP9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Trim16Q99PP9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.06■□□□□ 0
Trim16Q99PP9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim16Q99PP9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim16Q99PP9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.06■□□□□ 0
Trim16Q99PP9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim16Q99PP9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim16Q99PP9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim16Q99PP9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim16Q99PP9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim16Q99PP9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim16Q99PP9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.06■□□□□ 0
Trim16Q99PP9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Trim16Q99PP9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim16Q99PP9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim16Q99PP9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim16Q99PP9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim16Q99PP9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim16Q99PP9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim16Q99PP9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim16Q99PP9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Trim16Q99PP9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Trim16Q99PP9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim16Q99PP9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.05■□□□□ -0
Trim16Q99PP9 Gm17971-201ENSMUST00000190239 806 ntBASIC15.05■□□□□ -0
Trim16Q99PP9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.05■□□□□ -0
Trim16Q99PP9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim16Q99PP9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim16Q99PP9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim16Q99PP9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim16Q99PP9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
Trim16Q99PP9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim16Q99PP9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim16Q99PP9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim16Q99PP9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim16Q99PP9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim16Q99PP9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim16Q99PP9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Trim16Q99PP9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim16Q99PP9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim16Q99PP9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim16Q99PP9 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.04■□□□□ -0
Trim16Q99PP9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.04■□□□□ -0
Trim16Q99PP9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.04■□□□□ -0
Trim16Q99PP9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.04■□□□□ -0
Trim16Q99PP9 Gm25406-201ENSMUST00000157599 105 ntBASIC15.04■□□□□ -0
Trim16Q99PP9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim16Q99PP9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.04■□□□□ -0
Trim16Q99PP9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.04■□□□□ -0
Trim16Q99PP9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms