Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim33Q99PP7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim33Q99PP7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim33Q99PP7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim33Q99PP7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim33Q99PP7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Trim33Q99PP7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim33Q99PP7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim33Q99PP7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim33Q99PP7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.27■□□□□ 0.04
Trim33Q99PP7 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.27■□□□□ 0.04
Trim33Q99PP7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim33Q99PP7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim33Q99PP7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim33Q99PP7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim33Q99PP7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim33Q99PP7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trim33Q99PP7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim33Q99PP7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Gm11434-201ENSMUST00000122379 629 ntBASIC15.26■□□□□ 0.03
Trim33Q99PP7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Gm4535-201ENSMUST00000182274 558 ntBASIC15.26■□□□□ 0.03
Trim33Q99PP7 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.26■□□□□ 0.03
Trim33Q99PP7 Gm6296-201ENSMUST00000222599 943 ntBASIC15.26■□□□□ 0.03
Trim33Q99PP7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim33Q99PP7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Rps4l-201ENSMUST00000071745 943 ntBASIC15.26■□□□□ 0.03
Trim33Q99PP7 Gm10355-201ENSMUST00000097146 517 ntBASIC15.26■□□□□ 0.03
Trim33Q99PP7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim33Q99PP7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.26■□□□□ 0.03
Trim33Q99PP7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim33Q99PP7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim33Q99PP7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.25■□□□□ 0.03
Trim33Q99PP7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim33Q99PP7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Gm13418-201ENSMUST00000119097 944 ntBASIC15.24■□□□□ 0.03
Trim33Q99PP7 Mir8098-201ENSMUST00000184011 137 ntBASIC15.24■□□□□ 0.03
Trim33Q99PP7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim33Q99PP7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms