Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Gm19164-201ENSMUST00000210667 640 ntBASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Gm14859-201ENSMUST00000117752 357 ntBASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Gm27867-201ENSMUST00000184778 125 ntBASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf3Q99LI7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Gm14722-201ENSMUST00000118943 689 ntBASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf3Q99LI7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Gm4459-201ENSMUST00000118750 468 ntBASIC14.87□□□□□ -0.03
Cstf3Q99LI7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cstf3Q99LI7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms