Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rfc4Q99J62 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfc4Q99J62 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Rfc4Q99J62 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfc4Q99J62 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.69■□□□□ 0.42
Rfc4Q99J62 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.69■□□□□ 0.42
Rfc4Q99J62 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rfc4Q99J62 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.69■□□□□ 0.42
Rfc4Q99J62 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.68■□□□□ 0.42
Rfc4Q99J62 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.68■□□□□ 0.42
Rfc4Q99J62 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.68■□□□□ 0.42
Rfc4Q99J62 Gm10154-201ENSMUST00000084445 354 ntBASIC17.68■□□□□ 0.42
Rfc4Q99J62 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfc4Q99J62 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Gm27622-201ENSMUST00000183779 60 ntBASIC17.67■□□□□ 0.42
Rfc4Q99J62 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfc4Q99J62 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.66■□□□□ 0.42
Rfc4Q99J62 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.66■□□□□ 0.42
Rfc4Q99J62 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc4Q99J62 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.66■□□□□ 0.42
Rfc4Q99J62 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.66■□□□□ 0.42
Rfc4Q99J62 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms