Protein–RNA interactions for Protein: Q91ZW3

Smarca5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, mousemouse

Known RBP Predictions only

Length 1,051 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca5Q91ZW3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarca5Q91ZW3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.88■□□□□ 0.61
Smarca5Q91ZW3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smarca5Q91ZW3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Gm10060-201ENSMUST00000212002 111 ntBASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Sybu-209ENSMUST00000228639 4113 ntBASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smarca5Q91ZW3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Gm8318-201ENSMUST00000182954 872 ntBASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Gm6550-201ENSMUST00000187574 993 ntBASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarca5Q91ZW3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Mir5131-201ENSMUST00000175426 93 ntBASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarca5Q91ZW3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarca5Q91ZW3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms