Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdha9Q91Y11 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdha9Q91Y11 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Gm27628-201ENSMUST00000184911 107 ntBASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdha9Q91Y11 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Gm10499-201ENSMUST00000174094 934 ntBASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Gm4899-201ENSMUST00000178708 719 ntBASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha9Q91Y11 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.31■□□□□ 0.2
Pcdha9Q91Y11 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms