Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhb1Q91Y08 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb1Q91Y08 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb1Q91Y08 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Gm25990-201ENSMUST00000102440 86 ntBASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Gm17971-201ENSMUST00000190239 806 ntBASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Gm6089-201ENSMUST00000197666 938 ntBASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb1Q91Y08 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Rps4l-201ENSMUST00000071745 943 ntBASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb1Q91Y08 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Sybu-209ENSMUST00000228639 4113 ntBASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb1Q91Y08 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.96■□□□□ 0.14
Pcdhb1Q91Y08 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb1Q91Y08 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb1Q91Y08 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb1Q91Y08 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms