Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Mir1895-201ENSMUST00000122615 79 ntBASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Gm27494-201ENSMUST00000184735 189 ntBASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb18Q91Y02 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Gm8396-201ENSMUST00000057361 823 ntBASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb18Q91Y02 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Gm27301-201ENSMUST00000184012 127 ntBASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb18Q91Y02 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb18Q91Y02 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms