Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Gm7230-201ENSMUST00000173026 815 ntBASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhga4Q91XY4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga4Q91XY4 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Gm13418-201ENSMUST00000119097 944 ntBASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Gm8344-201ENSMUST00000119813 856 ntBASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga4Q91XY4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms