Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lims2Q91XD2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lims2Q91XD2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.65■□□□□ 0.1
Lims2Q91XD2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.65■□□□□ 0.1
Lims2Q91XD2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lims2Q91XD2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lims2Q91XD2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lims2Q91XD2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.64■□□□□ 0.09
Lims2Q91XD2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.64■□□□□ 0.09
Lims2Q91XD2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.64■□□□□ 0.09
Lims2Q91XD2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lims2Q91XD2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lims2Q91XD2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Lims2Q91XD2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Lims2Q91XD2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Gm2756-201ENSMUST00000195851 400 ntBASIC15.62■□□□□ 0.09
Lims2Q91XD2 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.62■□□□□ 0.09
Lims2Q91XD2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lims2Q91XD2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.61■□□□□ 0.09
Lims2Q91XD2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.61■□□□□ 0.09
Lims2Q91XD2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Gm16026-204ENSMUST00000162652 683 ntBASIC15.61■□□□□ 0.09
Lims2Q91XD2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.61■□□□□ 0.09
Lims2Q91XD2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.61■□□□□ 0.09
Lims2Q91XD2 Gm10154-201ENSMUST00000084445 354 ntBASIC15.61■□□□□ 0.09
Lims2Q91XD2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lims2Q91XD2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms