Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm17807-201ENSMUST00000186869 298 ntBASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Gm7506-201ENSMUST00000207758 815 ntBASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Gm4459-201ENSMUST00000118750 468 ntBASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Gm12895-201ENSMUST00000122214 226 ntBASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Gm12497-201ENSMUST00000138778 237 ntBASIC12.91□□□□□ -0.34
H1fooQ8VIK3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
H1fooQ8VIK3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Gm7977-201ENSMUST00000193787 748 ntBASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Gm19164-201ENSMUST00000210667 640 ntBASIC12.9□□□□□ -0.34
H1fooQ8VIK3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H1fooQ8VIK3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
H1fooQ8VIK3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
H1fooQ8VIK3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
H1fooQ8VIK3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
H1fooQ8VIK3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
H1fooQ8VIK3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Gm18622-201ENSMUST00000219361 595 ntBASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
H1fooQ8VIK3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms