Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Gm16215-201ENSMUST00000161990 637 ntBASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Gm9908-201ENSMUST00000211534 448 ntBASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cspg4Q8VHY0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cspg4Q8VHY0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cspg4Q8VHY0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms