Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.6□□□□□ -0.39
Rab40cQ8VHQ4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab40cQ8VHQ4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rab40cQ8VHQ4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Rab40cQ8VHQ4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rab40cQ8VHQ4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Gm10252-201ENSMUST00000209541 832 ntBASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Gm7367-201ENSMUST00000057611 492 ntBASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab40cQ8VHQ4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms