Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.06■□□□□ 0
Q8VDP2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.06■□□□□ 0
Q8VDP2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Q8VDP2 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.06■□□□□ 0
Q8VDP2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.06■□□□□ 0
Q8VDP2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.06■□□□□ 0
Q8VDP2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Q8VDP2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Q8VDP2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Q8VDP2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Q8VDP2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Q8VDP2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.06■□□□□ 0
Q8VDP2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Q8VDP2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Q8VDP2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Q8VDP2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Q8VDP2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Q8VDP2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Q8VDP2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Q8VDP2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Q8VDP2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.05■□□□□ 0
Q8VDP2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Q8VDP2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Q8VDP2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Q8VDP2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.05■□□□□ -0
Q8VDP2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.05■□□□□ -0
Q8VDP2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.05■□□□□ -0
Q8VDP2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.05■□□□□ -0
Q8VDP2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
Q8VDP2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.05■□□□□ -0
Q8VDP2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.05■□□□□ -0
Q8VDP2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Q8VDP2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Q8VDP2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Q8VDP2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Q8VDP2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Q8VDP2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Q8VDP2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Q8VDP2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Q8VDP2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Q8VDP2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.04■□□□□ -0
Q8VDP2 Gm37105-201ENSMUST00000192251 2085 ntBASIC15.04■□□□□ -0
Q8VDP2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Q8VDP2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Q8VDP2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.04■□□□□ -0
Q8VDP2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.04■□□□□ -0
Q8VDP2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.04■□□□□ -0
Q8VDP2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Q8VDP2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.04■□□□□ -0
Q8VDP2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Q8VDP2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.04■□□□□ -0
Q8VDP2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Q8VDP2 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.04■□□□□ -0
Q8VDP2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.04■□□□□ -0
Q8VDP2 Gm2559-201ENSMUST00000201323 363 ntBASIC15.04■□□□□ -0
Q8VDP2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Q8VDP2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Q8VDP2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Q8VDP2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Q8VDP2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Q8VDP2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms