Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afjQ8R1M2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Gm6659-201ENSMUST00000174752 547 ntBASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Gm29518-201ENSMUST00000190858 372 ntBASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afjQ8R1M2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Mir6404-201ENSMUST00000183699 94 ntBASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afjQ8R1M2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afjQ8R1M2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms