Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Gm24158-201ENSMUST00000175263 71 ntBASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Mir7023-201ENSMUST00000185093 64 ntBASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vopp1Q8R1C3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vopp1Q8R1C3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Gm27622-201ENSMUST00000183779 60 ntBASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Gm27306-201ENSMUST00000183970 107 ntBASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Gm18766-201ENSMUST00000189811 808 ntBASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vopp1Q8R1C3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vopp1Q8R1C3 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.14■□□□□ 0.17
Vopp1Q8R1C3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vopp1Q8R1C3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Vopp1Q8R1C3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vopp1Q8R1C3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms