Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Gm23935-201ENSMUST00000102303 57 ntBASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Gm24270-201ENSMUST00000102326 57 ntBASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Gm24245-201ENSMUST00000157318 57 ntBASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Gm25911-201ENSMUST00000157621 56 ntBASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Gm18489-201ENSMUST00000172565 551 ntBASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Gm7787-201ENSMUST00000216858 688 ntBASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Gm9682-201ENSMUST00000197505 556 ntBASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Prob1-201ENSMUST00000097619 3021 ntBASIC18.17■□□□□ 0.5
Rbm28Q8CGC6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rbm28Q8CGC6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 App-207ENSMUST00000227737 2827 ntBASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rbm28Q8CGC6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms