Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Vcpip1Q8CDG3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Gm15165-201ENSMUST00000118140 502 ntBASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vcpip1Q8CDG3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vcpip1Q8CDG3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.52■□□□□ 0.23
Vcpip1Q8CDG3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcpip1Q8CDG3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcpip1Q8CDG3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Vcpip1Q8CDG3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcpip1Q8CDG3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcpip1Q8CDG3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcpip1Q8CDG3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcpip1Q8CDG3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Vcpip1Q8CDG3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vcpip1Q8CDG3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vcpip1Q8CDG3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms