Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Gm10175-201ENSMUST00000086013 645 ntBASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Alx1Q8C8B0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Alx1Q8C8B0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.89■□□□□ 0.46
Alx1Q8C8B0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Alx1Q8C8B0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Alx1Q8C8B0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx1Q8C8B0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Mir3113-201ENSMUST00000175478 76 ntBASIC17.88■□□□□ 0.45
Alx1Q8C8B0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Gm45747-201ENSMUST00000212203 999 ntBASIC17.88■□□□□ 0.45
Alx1Q8C8B0 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx1Q8C8B0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Alx1Q8C8B0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Alx1Q8C8B0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Alx1Q8C8B0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
Alx1Q8C8B0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Alx1Q8C8B0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Alx1Q8C8B0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Alx1Q8C8B0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Alx1Q8C8B0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Alx1Q8C8B0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.87■□□□□ 0.45
Alx1Q8C8B0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms