Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Gm18733-201ENSMUST00000173950 856 ntBASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Gm27300-201ENSMUST00000184085 97 ntBASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Gm27335-201ENSMUST00000184758 97 ntBASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp44Q8C2S0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp44Q8C2S0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Usp44Q8C2S0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp44Q8C2S0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.94■□□□□ 0.46
Usp44Q8C2S0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp44Q8C2S0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms