Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Gm27437-201ENSMUST00000183429 107 ntBASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Gm10253-201ENSMUST00000194270 940 ntBASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptcd1Q8C2E4 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.89■□□□□ 0.62
Ptcd1Q8C2E4 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.89■□□□□ 0.62
Ptcd1Q8C2E4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Gm24158-201ENSMUST00000175263 71 ntBASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ptcd1Q8C2E4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Gm5866-201ENSMUST00000177881 973 ntBASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptcd1Q8C2E4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptcd1Q8C2E4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Ptcd1Q8C2E4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptcd1Q8C2E4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptcd1Q8C2E4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptcd1Q8C2E4 Gm22065-201ENSMUST00000103753 110 ntBASIC18.87■□□□□ 0.61
Ptcd1Q8C2E4 Gm22066-201ENSMUST00000103761 110 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms