Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trub1Q8C0D0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Gm6376-201ENSMUST00000209407 580 ntBASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.86■□□□□ 0.13
Trub1Q8C0D0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Rps4l-201ENSMUST00000071745 943 ntBASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Sybu-209ENSMUST00000228639 4113 ntBASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Trub1Q8C0D0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.84■□□□□ 0.13
Trub1Q8C0D0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms