Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Gm2810-201ENSMUST00000118681 990 ntBASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.04□□□□□ -0.48
Chd9Q8BYH8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Gm28630-201ENSMUST00000187806 498 ntBASIC12.04□□□□□ -0.48
Chd9Q8BYH8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chd9Q8BYH8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Gm4984-201ENSMUST00000115987 360 ntBASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Gm13461-201ENSMUST00000120980 662 ntBASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Gm10154-201ENSMUST00000084445 354 ntBASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Gm18766-201ENSMUST00000189811 808 ntBASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd9Q8BYH8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Gm18246-201ENSMUST00000221023 728 ntBASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd9Q8BYH8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd9Q8BYH8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms