Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.89□□□□□ -0.03
Cpne3Q8BT60 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne3Q8BT60 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.88□□□□□ -0.03
Cpne3Q8BT60 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Gm44454-201ENSMUST00000198541 138 ntBASIC14.88□□□□□ -0.03
Cpne3Q8BT60 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne3Q8BT60 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm8825-201ENSMUST00000182565 998 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm4518-201ENSMUST00000182638 718 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms