Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.19■□□□□ 0.18
Trpa1Q8BLA8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Gm15173-201ENSMUST00000122049 433 ntBASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trpa1Q8BLA8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trpa1Q8BLA8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Mir5131-201ENSMUST00000175426 93 ntBASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trpa1Q8BLA8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms