Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim23Q8BGX0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim23Q8BGX0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim23Q8BGX0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Trim23Q8BGX0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Grk6-207ENSMUST00000225925 2769 ntBASIC14.83□□□□□ -0.04
Trim23Q8BGX0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim23Q8BGX0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Gm27300-201ENSMUST00000184085 97 ntBASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Gm27335-201ENSMUST00000184758 97 ntBASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim23Q8BGX0 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 App-207ENSMUST00000227737 2827 ntBASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim23Q8BGX0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms