Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Samm50Q8BGH2 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Gm5864-201ENSMUST00000202263 970 ntBASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Samm50Q8BGH2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Mir8098-201ENSMUST00000184011 137 ntBASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Samm50Q8BGH2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Samm50Q8BGH2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Samm50Q8BGH2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Samm50Q8BGH2 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.02■□□□□ 0.47
Samm50Q8BGH2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Samm50Q8BGH2 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.01■□□□□ 0.47
Samm50Q8BGH2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18■□□□□ 0.47
Samm50Q8BGH2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms