Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim36Q80WG7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim36Q80WG7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim36Q80WG7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim36Q80WG7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim36Q80WG7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim36Q80WG7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim36Q80WG7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trim36Q80WG7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.85□□□□□ -0.03
Trim36Q80WG7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim36Q80WG7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Gm44430-201ENSMUST00000203376 995 ntBASIC14.85□□□□□ -0.03
Trim36Q80WG7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim36Q80WG7 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.85□□□□□ -0.03
Trim36Q80WG7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.85□□□□□ -0.03
Trim36Q80WG7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.85□□□□□ -0.03
Trim36Q80WG7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim36Q80WG7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms