Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rpap1Q80TE0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Rpap1Q80TE0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rpap1Q80TE0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rpap1Q80TE0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC23.64■■□□□ 1.37
Rpap1Q80TE0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rpap1Q80TE0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rpap1Q80TE0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rpap1Q80TE0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rpap1Q80TE0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rpap1Q80TE0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rpap1Q80TE0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rpap1Q80TE0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rpap1Q80TE0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rpap1Q80TE0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC23.64■■□□□ 1.37
Rpap1Q80TE0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Gm27838-201ENSMUST00000184829 128 ntBASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Gm20628-201ENSMUST00000177363 3215 ntBASIC23.63■■□□□ 1.37
Rpap1Q80TE0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Gm42466-201ENSMUST00000202099 1301 ntBASIC23.63■■□□□ 1.37
Rpap1Q80TE0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpap1Q80TE0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpap1Q80TE0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC23.62■■□□□ 1.37
Rpap1Q80TE0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC23.62■■□□□ 1.37
Rpap1Q80TE0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC23.62■■□□□ 1.37
Rpap1Q80TE0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpap1Q80TE0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC23.62■■□□□ 1.37
Rpap1Q80TE0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpap1Q80TE0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpap1Q80TE0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC23.62■■□□□ 1.37
Rpap1Q80TE0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpap1Q80TE0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Rpap1Q80TE0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Rpap1Q80TE0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rpap1Q80TE0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rpap1Q80TE0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Rpap1Q80TE0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC23.61■■□□□ 1.37
Rpap1Q80TE0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Rpap1Q80TE0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rpap1Q80TE0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rpap1Q80TE0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Gm24694-201ENSMUST00000180054 110 ntBASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Gm27663-201ENSMUST00000184839 110 ntBASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Gm42473-201ENSMUST00000201056 2291 ntBASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpap1Q80TE0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 AC158529.1-201ENSMUST00000223618 239 ntBASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Rpap1Q80TE0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms