Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf38bQ80SY5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.08■□□□□ 0.16
Prpf38bQ80SY5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf38bQ80SY5 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Gm9172-201ENSMUST00000212092 954 ntBASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf38bQ80SY5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf38bQ80SY5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Asic1-205ENSMUST00000228185 1818 ntBASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Prob1-201ENSMUST00000097619 3021 ntBASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Mir6977-201ENSMUST00000184960 64 ntBASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf38bQ80SY5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf38bQ80SY5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms