Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.18□□□□□ -0.14
Pif1Q80SX8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Gm44872-201ENSMUST00000207864 420 ntBASIC14.18□□□□□ -0.14
Pif1Q80SX8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.18□□□□□ -0.14
Pif1Q80SX8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pif1Q80SX8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.17□□□□□ -0.14
Pif1Q80SX8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.17□□□□□ -0.14
Pif1Q80SX8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pif1Q80SX8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.16□□□□□ -0.14
Pif1Q80SX8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Gm27301-201ENSMUST00000184012 127 ntBASIC14.16□□□□□ -0.14
Pif1Q80SX8 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.16□□□□□ -0.14
Pif1Q80SX8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.16□□□□□ -0.14
Pif1Q80SX8 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.16□□□□□ -0.14
Pif1Q80SX8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pif1Q80SX8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Pif1Q80SX8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pif1Q80SX8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms