Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Gm27920-201ENSMUST00000183953 96 ntBASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx55Q6ZPL9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Gm18766-201ENSMUST00000189811 808 ntBASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Gm7730-201ENSMUST00000212486 454 ntBASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Gm9063-201ENSMUST00000223299 582 ntBASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx55Q6ZPL9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ddx55Q6ZPL9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Ddx55Q6ZPL9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ddx55Q6ZPL9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ddx55Q6ZPL9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.39■□□□□ 0.37
Ddx55Q6ZPL9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms