Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Timd4Q6U7R4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Timd4Q6U7R4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Timd4Q6U7R4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.29□□□□□ -0.12
Timd4Q6U7R4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Timd4Q6U7R4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Timd4Q6U7R4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Timd4Q6U7R4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Timd4Q6U7R4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Timd4Q6U7R4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Timd4Q6U7R4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Timd4Q6U7R4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.29□□□□□ -0.12
Timd4Q6U7R4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Timd4Q6U7R4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.28□□□□□ -0.12
Timd4Q6U7R4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Timd4Q6U7R4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Timd4Q6U7R4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Gm13036-201ENSMUST00000117799 748 ntBASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Timd4Q6U7R4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.26□□□□□ -0.13
Timd4Q6U7R4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms