Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 Gm11025-201ENSMUST00000140773 466 ntBASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 Gm10499-201ENSMUST00000174094 934 ntBASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.36■□□□□ 0.53
Npc1l1Q6T3U4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Gm5177-201ENSMUST00000183092 997 ntBASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1l1Q6T3U4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Gm14057-201ENSMUST00000120631 482 ntBASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Gm45747-201ENSMUST00000212203 999 ntBASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1l1Q6T3U4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Gm27494-201ENSMUST00000184735 189 ntBASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.33■□□□□ 0.53
Npc1l1Q6T3U4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms