Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Gm9824-201ENSMUST00000178707 561 ntBASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Gm38225-201ENSMUST00000194001 393 ntBASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Snrnp40Q6PE01 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Gm2423-201ENSMUST00000074863 733 ntBASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Snrnp40Q6PE01 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Gm13216-201ENSMUST00000117145 591 ntBASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Gm8410-201ENSMUST00000117225 605 ntBASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Gm13453-201ENSMUST00000118708 357 ntBASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Gm13823-201ENSMUST00000119930 345 ntBASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms