Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col7a1Q63870 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.55□□□□□ -0.4
Col7a1Q63870 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col7a1Q63870 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col7a1Q63870 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col7a1Q63870 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.55□□□□□ -0.4
Col7a1Q63870 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col7a1Q63870 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col7a1Q63870 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col7a1Q63870 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col7a1Q63870 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col7a1Q63870 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col7a1Q63870 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col7a1Q63870 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col7a1Q63870 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col7a1Q63870 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col7a1Q63870 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col7a1Q63870 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
Col7a1Q63870 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col7a1Q63870 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col7a1Q63870 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.54□□□□□ -0.4
Col7a1Q63870 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col7a1Q63870 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.54□□□□□ -0.4
Col7a1Q63870 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col7a1Q63870 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col7a1Q63870 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col7a1Q63870 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.54□□□□□ -0.4
Col7a1Q63870 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col7a1Q63870 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col7a1Q63870 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col7a1Q63870 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col7a1Q63870 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col7a1Q63870 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Col7a1Q63870 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.54□□□□□ -0.4
Col7a1Q63870 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col7a1Q63870 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col7a1Q63870 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col7a1Q63870 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.53□□□□□ -0.4
Col7a1Q63870 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col7a1Q63870 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col7a1Q63870 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.53□□□□□ -0.4
Col7a1Q63870 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col7a1Q63870 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col7a1Q63870 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col7a1Q63870 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col7a1Q63870 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col7a1Q63870 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col7a1Q63870 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.53□□□□□ -0.4
Col7a1Q63870 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col7a1Q63870 Gm7399-201ENSMUST00000032395 858 ntBASIC12.53□□□□□ -0.4
Col7a1Q63870 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col7a1Q63870 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col7a1Q63870 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col7a1Q63870 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col7a1Q63870 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.53□□□□□ -0.4
Col7a1Q63870 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col7a1Q63870 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col7a1Q63870 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col7a1Q63870 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col7a1Q63870 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.52□□□□□ -0.4
Col7a1Q63870 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.52□□□□□ -0.4
Col7a1Q63870 Gm43118-201ENSMUST00000199149 775 ntBASIC12.52□□□□□ -0.4
Col7a1Q63870 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col7a1Q63870 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col7a1Q63870 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col7a1Q63870 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col7a1Q63870 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col7a1Q63870 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Col7a1Q63870 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.52□□□□□ -0.4
Col7a1Q63870 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Col7a1Q63870 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col7a1Q63870 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col7a1Q63870 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col7a1Q63870 Mir7032-201ENSMUST00000185154 79 ntBASIC12.52□□□□□ -0.41
Col7a1Q63870 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col7a1Q63870 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.52□□□□□ -0.41
Col7a1Q63870 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.52□□□□□ -0.41
Col7a1Q63870 Gm9229-201ENSMUST00000222777 126 ntBASIC12.52□□□□□ -0.41
Col7a1Q63870 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col7a1Q63870 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.52□□□□□ -0.41
Col7a1Q63870 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col7a1Q63870 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.52□□□□□ -0.41
Col7a1Q63870 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col7a1Q63870 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col7a1Q63870 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col7a1Q63870 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
Col7a1Q63870 Gm24514-201ENSMUST00000174961 285 ntBASIC12.51□□□□□ -0.41
Col7a1Q63870 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.51□□□□□ -0.41
Col7a1Q63870 Gm18307-201ENSMUST00000206864 949 ntBASIC12.51□□□□□ -0.41
Col7a1Q63870 Gm19309-201ENSMUST00000218295 205 ntBASIC12.51□□□□□ -0.41
Col7a1Q63870 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.51□□□□□ -0.41
Col7a1Q63870 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.51□□□□□ -0.41
Col7a1Q63870 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col7a1Q63870 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms