Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sycp1Q62209 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sycp1Q62209 Gm11452-201ENSMUST00000122376 690 ntBASIC17.28■□□□□ 0.36
Sycp1Q62209 Gm12497-201ENSMUST00000138778 237 ntBASIC17.28■□□□□ 0.36
Sycp1Q62209 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sycp1Q62209 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.28■□□□□ 0.36
Sycp1Q62209 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sycp1Q62209 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sycp1Q62209 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sycp1Q62209 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Sycp1Q62209 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sycp1Q62209 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sycp1Q62209 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sycp1Q62209 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sycp1Q62209 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Sycp1Q62209 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Sycp1Q62209 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sycp1Q62209 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sycp1Q62209 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sycp1Q62209 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sycp1Q62209 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sycp1Q62209 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sycp1Q62209 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sycp1Q62209 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sycp1Q62209 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.27■□□□□ 0.36
Sycp1Q62209 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.27■□□□□ 0.36
Sycp1Q62209 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.27■□□□□ 0.36
Sycp1Q62209 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sycp1Q62209 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Sycp1Q62209 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sycp1Q62209 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sycp1Q62209 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sycp1Q62209 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Sycp1Q62209 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Sycp1Q62209 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.26■□□□□ 0.35
Sycp1Q62209 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Gm8097-201ENSMUST00000117903 829 ntBASIC17.26■□□□□ 0.35
Sycp1Q62209 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.26■□□□□ 0.35
Sycp1Q62209 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.26■□□□□ 0.35
Sycp1Q62209 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.26■□□□□ 0.35
Sycp1Q62209 Gm8655-201ENSMUST00000221159 852 ntBASIC17.26■□□□□ 0.35
Sycp1Q62209 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.26■□□□□ 0.35
Sycp1Q62209 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sycp1Q62209 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.26■□□□□ 0.35
Sycp1Q62209 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sycp1Q62209 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sycp1Q62209 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.25■□□□□ 0.35
Sycp1Q62209 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Sycp1Q62209 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Sycp1Q62209 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.25■□□□□ 0.35
Sycp1Q62209 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sycp1Q62209 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Sycp1Q62209 Gm27741-201ENSMUST00000185060 237 ntBASIC17.25■□□□□ 0.35
Sycp1Q62209 Gm5864-201ENSMUST00000202263 970 ntBASIC17.25■□□□□ 0.35
Sycp1Q62209 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Gm18622-201ENSMUST00000219361 595 ntBASIC17.25■□□□□ 0.35
Sycp1Q62209 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.25■□□□□ 0.35
Sycp1Q62209 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.25■□□□□ 0.35
Sycp1Q62209 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.25■□□□□ 0.35
Sycp1Q62209 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sycp1Q62209 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sycp1Q62209 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sycp1Q62209 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms