Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim27Q62158 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim27Q62158 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim27Q62158 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Trim27Q62158 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim27Q62158 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim27Q62158 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.88■□□□□ 0.61
Trim27Q62158 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim27Q62158 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim27Q62158 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim27Q62158 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Trim27Q62158 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim27Q62158 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim27Q62158 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Trim27Q62158 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim27Q62158 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.87■□□□□ 0.61
Trim27Q62158 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim27Q62158 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim27Q62158 Gm10060-201ENSMUST00000212002 111 ntBASIC18.87■□□□□ 0.61
Trim27Q62158 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.87■□□□□ 0.61
Trim27Q62158 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim27Q62158 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Trim27Q62158 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.87■□□□□ 0.61
Trim27Q62158 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim27Q62158 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim27Q62158 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.87■□□□□ 0.61
Trim27Q62158 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim27Q62158 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trim27Q62158 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Trim27Q62158 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim27Q62158 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim27Q62158 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim27Q62158 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim27Q62158 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim27Q62158 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim27Q62158 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim27Q62158 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim27Q62158 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim27Q62158 Gm28659-201ENSMUST00000188013 759 ntBASIC18.85■□□□□ 0.61
Trim27Q62158 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.85■□□□□ 0.61
Trim27Q62158 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim27Q62158 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim27Q62158 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Trim27Q62158 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Trim27Q62158 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim27Q62158 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim27Q62158 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim27Q62158 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim27Q62158 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim27Q62158 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim27Q62158 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim27Q62158 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.84■□□□□ 0.61
Trim27Q62158 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.84■□□□□ 0.61
Trim27Q62158 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim27Q62158 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim27Q62158 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim27Q62158 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim27Q62158 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim27Q62158 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trim27Q62158 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim27Q62158 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Trim27Q62158 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms