Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Foxc1Q61572 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Gm14542-201ENSMUST00000118460 1248 ntBASIC11.33□□□□□ -0.6
Foxc1Q61572 Gm12497-201ENSMUST00000138778 237 ntBASIC11.33□□□□□ -0.6
Foxc1Q61572 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Foxc1Q61572 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.33□□□□□ -0.6
Foxc1Q61572 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.33□□□□□ -0.6
Foxc1Q61572 Gm37436-201ENSMUST00000193842 1085 ntBASIC11.33□□□□□ -0.6
Foxc1Q61572 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.33□□□□□ -0.6
Foxc1Q61572 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.33□□□□□ -0.6
Foxc1Q61572 Gm6376-201ENSMUST00000209407 580 ntBASIC11.33□□□□□ -0.6
Foxc1Q61572 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.33□□□□□ -0.6
Foxc1Q61572 CT010431.1-201ENSMUST00000221249 1080 ntBASIC11.33□□□□□ -0.6
Foxc1Q61572 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Foxc1Q61572 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Foxc1Q61572 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.32□□□□□ -0.6
Foxc1Q61572 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.32□□□□□ -0.6
Foxc1Q61572 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.32□□□□□ -0.6
Foxc1Q61572 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Foxc1Q61572 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.32□□□□□ -0.6
Foxc1Q61572 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.32□□□□□ -0.6
Foxc1Q61572 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.32□□□□□ -0.6
Foxc1Q61572 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.32□□□□□ -0.6
Foxc1Q61572 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Foxc1Q61572 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Foxc1Q61572 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Foxc1Q61572 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Foxc1Q61572 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Foxc1Q61572 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Prob1-201ENSMUST00000097619 3021 ntBASIC11.31□□□□□ -0.6
Foxc1Q61572 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Foxc1Q61572 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Foxc1Q61572 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms