Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.96■□□□□ 0.31
Ecm1Q61508 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ecm1Q61508 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ecm1Q61508 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ecm1Q61508 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ecm1Q61508 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ecm1Q61508 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ecm1Q61508 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ecm1Q61508 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ecm1Q61508 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.96■□□□□ 0.3
Ecm1Q61508 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.95■□□□□ 0.3
Ecm1Q61508 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.95■□□□□ 0.3
Ecm1Q61508 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Gm27437-201ENSMUST00000183429 107 ntBASIC16.95■□□□□ 0.3
Ecm1Q61508 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.95■□□□□ 0.3
Ecm1Q61508 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.95■□□□□ 0.3
Ecm1Q61508 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ecm1Q61508 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ecm1Q61508 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ecm1Q61508 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.94■□□□□ 0.3
Ecm1Q61508 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.94■□□□□ 0.3
Ecm1Q61508 Gm38294-201ENSMUST00000192831 381 ntBASIC16.94■□□□□ 0.3
Ecm1Q61508 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.94■□□□□ 0.3
Ecm1Q61508 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.94■□□□□ 0.3
Ecm1Q61508 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.94■□□□□ 0.3
Ecm1Q61508 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ecm1Q61508 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ecm1Q61508 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.93■□□□□ 0.3
Ecm1Q61508 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.93■□□□□ 0.3
Ecm1Q61508 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.93■□□□□ 0.3
Ecm1Q61508 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ecm1Q61508 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
Ecm1Q61508 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ecm1Q61508 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.92■□□□□ 0.3
Ecm1Q61508 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ecm1Q61508 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Ecm1Q61508 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ecm1Q61508 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ecm1Q61508 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.92■□□□□ 0.3
Ecm1Q61508 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.92■□□□□ 0.3
Ecm1Q61508 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ecm1Q61508 Gm23547-201ENSMUST00000158210 271 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms