Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Foxd1Q61345 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Foxd1Q61345 Gm6266-201ENSMUST00000203844 806 ntBASIC17.72■□□□□ 0.43
Foxd1Q61345 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxd1Q61345 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.72■□□□□ 0.43
Foxd1Q61345 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxd1Q61345 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Foxd1Q61345 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxd1Q61345 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.72■□□□□ 0.43
Foxd1Q61345 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxd1Q61345 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.72■□□□□ 0.43
Foxd1Q61345 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Foxd1Q61345 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxd1Q61345 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Foxd1Q61345 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
Foxd1Q61345 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Foxd1Q61345 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Foxd1Q61345 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 Gm14928-201ENSMUST00000120198 477 ntBASIC17.71■□□□□ 0.43
Foxd1Q61345 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.71■□□□□ 0.43
Foxd1Q61345 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Foxd1Q61345 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.71■□□□□ 0.43
Foxd1Q61345 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 Gm17968-201ENSMUST00000194902 784 ntBASIC17.71■□□□□ 0.43
Foxd1Q61345 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Foxd1Q61345 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Foxd1Q61345 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxd1Q61345 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Foxd1Q61345 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Foxd1Q61345 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Foxd1Q61345 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Foxd1Q61345 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.7■□□□□ 0.42
Foxd1Q61345 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Gm25287-201ENSMUST00000103846 110 ntBASIC17.7■□□□□ 0.42
Foxd1Q61345 Gm22918-201ENSMUST00000103855 110 ntBASIC17.7■□□□□ 0.42
Foxd1Q61345 Gm13453-201ENSMUST00000118708 357 ntBASIC17.7■□□□□ 0.42
Foxd1Q61345 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Foxd1Q61345 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.7■□□□□ 0.42
Foxd1Q61345 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.7■□□□□ 0.42
Foxd1Q61345 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Foxd1Q61345 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxd1Q61345 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Foxd1Q61345 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.7■□□□□ 0.42
Foxd1Q61345 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Foxd1Q61345 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Foxd1Q61345 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.69■□□□□ 0.42
Foxd1Q61345 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Foxd1Q61345 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.69■□□□□ 0.42
Foxd1Q61345 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.69■□□□□ 0.42
Foxd1Q61345 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.69■□□□□ 0.42
Foxd1Q61345 Gm17837-201ENSMUST00000186435 985 ntBASIC17.69■□□□□ 0.42
Foxd1Q61345 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.69■□□□□ 0.42
Foxd1Q61345 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.69■□□□□ 0.42
Foxd1Q61345 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd1Q61345 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Foxd1Q61345 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms