Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.72■□□□□ 0.11
Slc6a4Q60857 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Gm2756-201ENSMUST00000195851 400 ntBASIC15.72■□□□□ 0.11
Slc6a4Q60857 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.72■□□□□ 0.11
Slc6a4Q60857 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a4Q60857 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.72■□□□□ 0.11
Slc6a4Q60857 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a4Q60857 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Gm17271-201ENSMUST00000165535 355 ntBASIC15.71■□□□□ 0.11
Slc6a4Q60857 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.71■□□□□ 0.11
Slc6a4Q60857 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a4Q60857 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc6a4Q60857 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Slc6a4Q60857 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc6a4Q60857 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc6a4Q60857 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc6a4Q60857 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc6a4Q60857 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc6a4Q60857 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc6a4Q60857 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc6a4Q60857 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc6a4Q60857 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.7■□□□□ 0.1
Slc6a4Q60857 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.7■□□□□ 0.1
Slc6a4Q60857 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a4Q60857 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.69■□□□□ 0.1
Slc6a4Q60857 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a4Q60857 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.69■□□□□ 0.1
Slc6a4Q60857 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.69■□□□□ 0.1
Slc6a4Q60857 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Slc6a4Q60857 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms