Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClpbQ60649 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClpbQ60649 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClpbQ60649 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClpbQ60649 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.77□□□□□ -0.04
ClpbQ60649 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClpbQ60649 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ClpbQ60649 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ClpbQ60649 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClpbQ60649 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClpbQ60649 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClpbQ60649 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ClpbQ60649 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm13418-201ENSMUST00000119097 944 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ClpbQ60649 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ClpbQ60649 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
ClpbQ60649 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm8825-201ENSMUST00000182565 998 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm4518-201ENSMUST00000182638 718 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ClpbQ60649 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.77□□□□□ -0.05
ClpbQ60649 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ClpbQ60649 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.77□□□□□ -0.05
ClpbQ60649 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.77□□□□□ -0.05
ClpbQ60649 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
ClpbQ60649 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ClpbQ60649 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ClpbQ60649 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ClpbQ60649 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
ClpbQ60649 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ClpbQ60649 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.76□□□□□ -0.05
ClpbQ60649 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Gm25990-201ENSMUST00000102440 86 ntBASIC14.76□□□□□ -0.05
ClpbQ60649 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.76□□□□□ -0.05
ClpbQ60649 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.76□□□□□ -0.05
ClpbQ60649 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.76□□□□□ -0.05
ClpbQ60649 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.76□□□□□ -0.05
ClpbQ60649 Gm2651-201ENSMUST00000203560 838 ntBASIC14.76□□□□□ -0.05
ClpbQ60649 Gm6443-201ENSMUST00000203599 874 ntBASIC14.76□□□□□ -0.05
ClpbQ60649 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.76□□□□□ -0.05
ClpbQ60649 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ClpbQ60649 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ClpbQ60649 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.76□□□□□ -0.05
ClpbQ60649 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ClpbQ60649 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ClpbQ60649 BC037039-201ENSMUST00000192003 2205 ntBASIC14.76□□□□□ -0.05
ClpbQ60649 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ClpbQ60649 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.75□□□□□ -0.05
ClpbQ60649 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
ClpbQ60649 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.75□□□□□ -0.05
ClpbQ60649 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.75□□□□□ -0.05
ClpbQ60649 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.75□□□□□ -0.05
ClpbQ60649 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ClpbQ60649 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ClpbQ60649 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms