Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1h4Q60641 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.65□□□□□ -0.06
Nr1h4Q60641 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.65□□□□□ -0.06
Nr1h4Q60641 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Gm6623-201ENSMUST00000173570 544 ntBASIC14.65□□□□□ -0.06
Nr1h4Q60641 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.65□□□□□ -0.06
Nr1h4Q60641 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.64□□□□□ -0.07
Nr1h4Q60641 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Gm10013-201ENSMUST00000106074 672 ntBASIC14.64□□□□□ -0.07
Nr1h4Q60641 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.64□□□□□ -0.07
Nr1h4Q60641 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nr1h4Q60641 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Gm25406-201ENSMUST00000157599 105 ntBASIC14.63□□□□□ -0.07
Nr1h4Q60641 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.63□□□□□ -0.07
Nr1h4Q60641 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nr1h4Q60641 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms