Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm3Q5F4S9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trpm3Q5F4S9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm3Q5F4S9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm3Q5F4S9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm3Q5F4S9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm3Q5F4S9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm3Q5F4S9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trpm3Q5F4S9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trpm3Q5F4S9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Trpm3Q5F4S9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpm3Q5F4S9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Mir6977-201ENSMUST00000184960 64 ntBASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Gm27437-201ENSMUST00000183429 107 ntBASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trpm3Q5F4S9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Gm11543-201ENSMUST00000120758 370 ntBASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Gm5745-201ENSMUST00000183748 313 ntBASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trpm3Q5F4S9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Trpm3Q5F4S9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trpm3Q5F4S9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trpm3Q5F4S9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trpm3Q5F4S9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpm3Q5F4S9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpm3Q5F4S9 Gm24158-201ENSMUST00000175263 71 ntBASIC19.25■□□□□ 0.67
Trpm3Q5F4S9 Gm8116-201ENSMUST00000182917 1201 ntBASIC19.25■□□□□ 0.67
Trpm3Q5F4S9 Gm38294-201ENSMUST00000192831 381 ntBASIC19.25■□□□□ 0.67
Trpm3Q5F4S9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpm3Q5F4S9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trpm3Q5F4S9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms